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checking vocabularies

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This commit is contained in:
Lasha Kapanadze 2024-10-25 16:08:59 +04:00
parent 01b543dd74
commit fae8d17316
1 changed files with 147 additions and 22 deletions
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139
public/userarea/apilogic/process_import.php
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@ -22,6 +22,85 @@ $jsonEntries = $stmt->fetchAll(PDO::FETCH_ASSOC);
foreach ($jsonEntries as $entry) {
$data = json_decode($entry['json_data'], true);
$uuid = $entry['uuid'];
$analysis = array();
$compounds = array();
// check for result_TestName
foreach ($data['product']['reports'] as $report) {
foreach ($report['parts'] as $part) {
foreach ($part['analyses'] as $analysis) {
$analysisgroupcode = $analysis['analysisgroupcode'];
$result_TestName = $analysis['result_TestName'];
// groupcode validation
if($analysisgroupcode == '-' || $analysisgroupcode == '' || $analysisgroupcode == ' '){
$analysisgroupcode = 'NO_GROUPCODE';
}
// check in vocabulary
$query = "SELECT idanalysisvocabulary FROM analysisvocabulary WHERE analysiscode LIKE '$analysisgroupcode'";
$stmt = $pdo->prepare($query);
$result = $stmt->execute();
$result = $stmt->fetchColumn();
if(!$result){
// check for result_TestName
$query = "SELECT idanalysisvocabulary FROM analysisvocabulary WHERE nameanalysisvoc LIKE '$result_TestName'";
$stmt = $pdo->prepare($query);
$result = $stmt->execute();
$result = $stmt->fetchColumn();
if(!$result){
// add 0 to analysis array
array_push($analysis, 0);
}else{
// add 1 to analysis array
array_push($analysis, 1);
}
}else{
// add 1 to analysis array
array_push($analysis, 1);
}
}
}
}
// check for result_AnalytsName
foreach ($data['product']['reports'] as $report) {
foreach ($report['parts'] as $part) {
foreach ($part['analyses'] as $analysis) {
foreach ($analysis['results'] as $result) {
$result_AnalytsName = $result['result_AnalytsName'];
$cas = $result['cas'];
// cas validation
if($cas == '-' || $cas == '' || $cas == ' '){
$cas = 'NO_CAS';
}
// check in vocabulary
$query = "SELECT idcompoundsvocabulary FROM compundsvocabulary WHERE cascompoundvocabulary LIKE '%$cas%'";
$stmt = $pdo->prepare($query);
$result = $stmt->execute();
$result = $stmt->fetchColumn();
if(!$result){
// check for result_AnalytsName
$query = "SELECT idcompoundsvocabulary FROM compundsvocabulary WHERE namecompoundsvocabulary LIKE '$result_AnalytsName'";
$stmt = $pdo->prepare($query);
$result = $stmt->execute();
$result = $stmt->fetchColumn();
if(!$result){
// add 0 to compounds array
array_push($compounds, 0);
}else{
// add 1 to compounds array
array_push($compounds, 1);
}
}else{
// add 1 to compounds array
array_push($compounds, 1);
}
}
}
}
}
// Validate lab reference
$labId = getLaboratoryId($data['reflab'], $pdo);
@ -30,10 +109,11 @@ foreach ($jsonEntries as $entry) {
continue;
}
if(validateJson($data) && !in_array(0, $analysis) && !in_array(0, $compounds)){
// Validate and insert product
$productId = insertProduct($data['product'], $pdo, $uuid);
if ($productId && validateJson($data)) {
if ($productId) {
// Insert reports, parts, analyses, and results
foreach ($data['product']['reports'] as $report) {
$reportId = insertReport($report, $productId, $labId, $pdo, $uuid);
@ -42,10 +122,51 @@ foreach ($jsonEntries as $entry) {
$partId = insertPart($part, $reportId, $productId, $pdo, $uuid);
foreach ($part['analyses'] as $analysis) {
$analysisId = insertAnalysis($analysis, $partId, $productId, $reportId, $pdo, $uuid);
$result_TestName = $analysis['result_TestName'];
$groupcode = $analysis['analysisgroupcode'];
$query = "SELECT idanalysisvocabulary FROM analysisvocabulary WHERE analysiscode LIKE '$groupcode'";
$stmt = $pdo->prepare($query);
$res = $stmt->execute();
$res = $stmt->fetchColumn();
if($res){
$analysisCodeId = $res;
}else{
$query = "SELECT idanalysisvocabulary FROM analysisvocabulary WHERE nameanalysisvoc LIKE '$result_TestName'";
$stmt = $pdo->prepare($query);
$res = $stmt->execute();
$res = $stmt->fetchColumn();
if($res){
$analysisCodeId = $res;
}else{
$analysisCodeId = 'NO ANALYSIS ID FOUND';
}
}
$analysisId = insertAnalysis($analysis, $partId, $productId, $reportId, $pdo, $uuid, $analysisCodeId);
foreach ($analysis['results'] as $result) {
insertResult($result, $analysisId, $partId, $productId, $reportId, $pdo, $uuid);
$result_AnalytsName = $result['result_AnalytsName'];
$cas = $result['cas'];
$query = "SELECT idcompoundsvocabulary FROM compundsvocabulary WHERE cascompoundvocabulary LIKE '%$cas%'";
$stmt = $pdo->prepare($query);
$res = $stmt->execute();
$res = $stmt->fetchColumn();
if($res){
$compoundId = $res;
}else{
$query = "SELECT idcompoundsvocabulary FROM compundsvocabulary WHERE namecompoundsvocabulary LIKE '$result_AnalytsName'";
$stmt = $pdo->prepare($query);
$res = $stmt->execute();
$res = $stmt->fetchColumn();
if($res){
$compoundId = $res;
}else{
$compoundId = 'NO COMPOUND ID FOUND';
}
}
insertResult($result, $analysisId, $partId, $productId, $reportId, $pdo, $uuid, $compoundId);
}
}
}
@ -55,6 +176,10 @@ foreach ($jsonEntries as $entry) {
} else {
markForIntervention($entry['id'], $pdo);
}
} else {
markForIntervention($entry['id'], $pdo);
}
}
// Function definitions
@ -187,7 +312,7 @@ function insertPart($part, $reportId,$productId, $pdo, $uuid) {
}
function insertAnalysis($analysis, $partId, $productId, $reportId, $pdo, $uuid) {
function insertAnalysis($analysis, $partId, $productId, $reportId, $pdo, $uuid, $analysisCodeId) {
$query = "INSERT INTO analysis_project (result_TestName, test_Rating, test_Rating2, requirements, reference, analysisgroupcode, idpart, idproducts, idreports, importcode)
VALUES (:result_TestName, :test_Rating, :test_Rating2, :requirements, :reference, :analysisgroupcode, :idpart , :idproducts, :idreports, :importcode)";
@ -195,7 +320,7 @@ function insertAnalysis($analysis, $partId, $productId, $reportId, $pdo, $uuid)
$stmt->execute([
'idproducts' => $productId,
'idreports' => $reportId,
'result_TestName' => $analysis['result_TestName'],
'result_TestName' => $analysisCodeId,
'test_Rating' => $analysis['test_Rating'],
'test_Rating2' => $analysis['test_Rating2'],
'requirements' => $analysis['requirements'],
@ -207,13 +332,13 @@ function insertAnalysis($analysis, $partId, $productId, $reportId, $pdo, $uuid)
return $pdo->lastInsertId();
}
function insertResult($result, $analysisId, $partId, $productId, $reportId, $pdo, $uuid) {
function insertResult($result, $analysisId, $partId, $productId, $reportId, $pdo, $uuid, $compoundId) {
$query = "INSERT INTO result_project (result_AnalytsName, result_AnalytsRating, result_Value, result_Comment, test_Rating, test_Rating2, result_UnitofMeasure, cas, requirements, reference, idanalysis_project, idpart, idproducts, idreports, importcode)
VALUES (:result_AnalytsName, :result_AnalytsRating, :result_Value, :result_Comment, :test_Rating, :test_Rating2, :result_UnitofMeasure, :cas, :requirements, :reference, :idanalysis_project, :idpart, :idproducts, :idreports, :importcode)";
$stmt = $pdo->prepare($query);
$stmt->execute([
'result_AnalytsName' => $result['result_AnalytsName'],
'result_AnalytsName' => $compoundId,
'result_AnalytsRating' => $result['result_AnalytsRating'],
'result_Value' => $result['result_Value'],
'result_Comment' => $result['result_Comment'],